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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs75911764 chr4:39445899 A/ATTCTCTTAAAAT RPL9 chr4:39455744-39460568:- 1.05 10.36 3.06E-14 Box Plot
ACC rs7591772 chr2:61462400 C/G C2orf74 chr2:61372203-61391964:+ 0.62 6.71 1.46E-8 Box Plot
ACC rs7599741 chr2:114461550 G/T DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs7599832 chr2:114461585 G/A DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs760285 chr21:41161654 A/G IGSF5 chr21:41117334-41174023:+ 0.57 5.05 5.81E-6 Box Plot
ACC rs7604557 chr2:99747829 A/G TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs7608938 chr2:99782226 C/T TSGA10 chr2:99613724-99771427:- 0.57 5.59 8.51E-7 Box Plot
ACC rs76356932 chr6:86282278 A/AAAATACC SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs765156 chr20:44174423 G/A WFDC3 chr20:44376583-44420571:- 0.87 6.26 7.45E-8 Box Plot
ACC rs76554912 chr7:64493654 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs7661433 chr4:39488737 A/G RPL9 chr4:39455744-39460568:- 0.92 5.36 1.93E-6 Box Plot
ACC rs7679177 chr4:76853790 C/G NAAA chr4:76834810-76862204:- 0.54 5.6 8.05E-7 Box Plot
ACC rs76808260 chr7:76344194 G/A POMZP3 chr7:76239303-76256578:- 0.91 6.11 1.3E-7 Box Plot
ACC rs76858838 chr7:64947544 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.41 1.64E-6 Box Plot
ACC rs7700332 chr5:96307612 G/A ERAP2 chr5:96211643-96255420:+ 0.87 9.37 9.25E-13 Box Plot